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Index

Macromolecular dictionary (mmCIF) version 2.0.09

Category STRUCT_REF_SEQ

Name:
'struct_ref_seq'

Description:

   Data items in the STRUCT_REF_SEQ category provide a mechanism
   for indicating and annotating a region (or regions) of alignment
   between the sequence of an entity or biological unit described
   in the data block and the sequence in the referenced database
   entry.

Example:

Example 1 - based on the sequence alignment of CHER from M. xantus (36 to 288) and CHER from S. typhimurium (18 to 276).
 
    _struct_ref_seq.align_id          alg1
    _struct_ref_seq.ref_id            seqdb1
    _struct_ref_seq.seq_align_beg     36
    _struct_ref_seq.seq_align_end     288
    _struct_ref_seq.db_align_beg      18
    _struct_ref_seq.db_align_end      276
    _struct_ref_seq.details
    ; The alignment contains 3 gaps larger than 2 residues
    ;



Category groups:
    inclusive_group
    struct_group
Category key:
    _struct_ref_seq.align_id

Mandatory category: no